Starship Trait: Improved Temporal Insight (only Temporal Insight was added to the skill planner) http://sto.gamepedia.com/Trait:_Improved...al_Insight
Ground Device: Paradox Corrector http://sto.gamepedia.com/Paradox_Corrector
Ship Device: Temporal Negotiator http://sto.gamepedia.com/Temporal_Negotiator
(Through testing I found these devices have to be equipped in order to use them)
Episode 'The Dragon's Deceit'
Ground equipment: Stealth Operational Armor http://sto.gamepedia.com/Mission:_The_Dragon%27s_Deceit (one time only reward and there is no way to get another or replacement that I know of, but I believe it can be upgraded)
Ground weapon: Vaadwuar Pulsewave Pistol http://sto.gamepedia.com/Mission:_Takedown (one time only reward, though you may be able to get more from Vaadwuar lock boxes and the exchange) Should probably go into 'Other Weapons' category.
Episode 'What's Left Behind'
Elachi Kit Module - Subspace Rift (a universal module available for all careers that can be equipped into any type of kit module slot; one time only reward but can be reclaimed from 'Reclaim' tab in the Dilithium store) http://sto.gamepedia.com/Mission:_What%27s_Left_Behind
Episode 'Uneasy Allies
Romulan Imperial Navy ground set:
Romulan Imperial Navy Combat Armor
Romulan Imperial Navy Personal Shield
Romulan Imperial Navy Kit
Plasma Feedback Cascade - universal kit module available for all careers and can be equipped into any type of kit module slot (it comes in the box packed with the Romulan Imperial Navy Kit)
The STO wiki doesn't seem to even mention this module but it is mentioned in the dev blog http://www.arcgames.com/en/games/star-tr...ly-rewards
Plasma Repeater Pistol (not part of a set) Should probably go into 'Other Weapons' category.
Episode 'House Pegh'
Ground - Up Close and Personal
Space - Point Blank Shot
Starship - The Best Defense
Episode 'Time in a Bottle'
Chroniton Split Beam Rifle
Ground device: Temporal Flux Generator http://sto.gamepedia.com/Temporal_Flux_Generator
Episode 'Broken Circle'
Engineering bridge officer space skills - Emit Unstable Warp Bubble (Starts at Lieutenant rank)
Antichroniton Infused Tetryon Full Auto Rifle
Consumable ship device - Reactive Armor Catalyst (gives you 5 of this item and unlocks the ability to craft more in R&D Engineering found near the top of the list; all of these items are bound to character when you get them even when crafting more)
Soon to be released:
Universal Kit Module - Jam Subspace Transmissions
I'm sure there are ground and ship weapons, boff abilities, and traits from recent lock boxes that I didn't mention, but that would be time consuming having to search around to find info that the STO wiki is missing so I can list it here. But if anybody can think other things I missed please feel free to post here.